ASCT+B Validation Reports for Mouth (2026-04-01)

Invalid terms

These are the reports related to issues in the terms found in the ASCT+B table. We validate only CL, UBERON and PCL terms.

Terms not found

This report provides a list of terms not found neither in UBERON nor in CL. Please remove these terms from the ASCT+B table - disconsider this message if a term was recently added to the ontology.

UBERON:8000012
UBERON:8000011
UBERON:8000013
UBERON:8000014

Typos or punctuation mistakes

This report provides a general quality check of the terms used in the ASCT+B table. Typos, font case (upper case), punctuation mistakes in IDs: two colons, spaces, underscore instead of a colon.

No issues found.

Different labels

This report provides a list of terms having different names/labels found in the ontology and related to the one found in the ASCT+B table. Make sure to add the term's name/label in the column AS/N/LABEL or CT/N/LABEL. If the SME wants to give another name/label, please use the column AS/N or CT/N. N is the number in the column.

If the term's name/label and the name/label given by SME are too different, please make sure the term ID and its name/label are matching in OLS.

If the name/label in the ontology contains obsolete, please look into OLS, clicking on the term ID, for its replacement.

The term UBERON:0004923 has a different name/label in the source ontology in the following 1 row 31. The name/label in the ASCT+B table is mucosa of the lip and the one in the ontology is organ component layer. For reference, the given name/label by SMEs is mucosa of the lip. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

Blank ontology ID

This report provides a list of blank spreadsheet cells that often mean no ontology mapping found by the author. However, in some cases, a term with a synonym already exists. Please search in OLS.

You can find more information on the New CL terms or New UBERON terms reports.

No term id was found for the name/label tongue in the following 1 row 11.
No term id was found for the name/label junctional epithelium cell in the following 1 row 29.
No term id was found for the name/label basal ductal cell in the following 2 rows 34, 68.
No term id was found for the name/label periacinar fibroblast in the following 3 rows 43, 62, 79.
No term id was found for the name/label periductal fibroblast in the following 3 rows 45, 64, 81.
No term id was found for the name/label excretory duct epithelial cell in the following 2 rows 49, 85.
No term id was found for the name/label demilune acinar cell in the following 2 rows 52, 69.
No term id was found for the name/label mucous acinar cell in the following 2 rows 60, 77.
No term id was found for the name/label excretory duct in the following 1 row 85.
No term id was found for the name/label intercalated duct in the following 1 row 86.
No term id was found for the name/label striated duct in the following 1 row 87.

Blank ontology ID missing parent

This report provides a list of CT terms with blank ontology ID without an upper term from Cell Ontology. Please, create an upper level in the ASCT+B table and add an upper term for them. Please, make sure the term without ontology ID doesn't exist in the ontology.

The term junctional epithelium cell without ontology ID has no parent that is from the CL ontology in the following 1 row 29.
The term basal ductal cell without ontology ID has no parent that is from the CL ontology in the following 2 rows 34, 68.
The term periacinar fibroblast without ontology ID has no parent that is from the CL ontology in the following 3 rows 43, 62, 79.
The term periductal fibroblast without ontology ID has no parent that is from the CL ontology in the following 3 rows 45, 64, 81.
The term excretory duct epithelial cell without ontology ID has no parent that is from the CL ontology in the following 2 rows 49, 85.
The term demilune acinar cell without ontology ID has no parent that is from the CL ontology in the following 2 rows 52, 69.
The term mucous acinar cell without ontology ID has no parent that is from the CL ontology in the following 2 rows 60, 77.

Terms from another ontology

This report provides a list of terms from another ontologies that we do not validate. Foundational Model of Anatomy (FMA) ontology IDs are provided when an adequate term is not found in UBERON. Same case for Anatomic Ontology for Human Lung Maturation (LMHA) and Interlex IDs (ILX) from Stimulating Peripheral Activity to Relieve Conditions (SPARC). You can request cross-database request the same way a new term request. Please be sure if a term with a related synonym is already in the source ontologies CL or UBERON or PCL.

No issues found.

Relationship reports

These reports are other representations of the ASCT+B table. We split each row into pairs with adjacent terms, resulting in a table with two primary columns, object (o), left side and subject (s), right side. The experts' labels for the subject and object are in the columns user_slabel and user_olabel. The other columns are the subject label (s_label) and object label (o_label), the label from the source ontologies.

The report means it could not find a partonomy relationship in the source ontologies, but it doesn't mean this relationship is entirely invalid. In some cases, the pair is in the inverse order. In other cases, the relationship is missing in the source ontologies. Finally, how it was modelled in the ASCT+B table is not aligned with the ontologies sources and needs a more general discussion.

How to read a table entry

In the ASCT+B table

AS/2	AS/2/LABEL	AS/2/ID	AS/3	AS/3/LABEL	AS/3/ID
lens	lens	UBERON:0000965	ciliary zonules	suspensory ligament of lens	UBERON:0006762

In the Relationship Report

s	slabel	user_slabel	o	olabel	user_olabel
UBERON:0006762	suspensory ligament of lens	ciliary zonules	UBERON:0000965	lens	lens

Relationship AS-AS report

This table contains terms for anatomical structures that are related to each other according to the ASCT+B table but are not related to each other in source ontologies via one of the relation types we consider valid for ASCT+B tables. Valid relationships are: part_of, e.g. corneal endothelium part_of cornea; subClassOf, e.g. left kidney subClassOf (is_a) kidney; and overlaps (has some part in), e.g. ureter overlaps kidney; connected_to, e.g. TBA. part_of and subClassOf relationships should be specific to general, e.g. left kidney (specific) to kidney (general); corneal endothelium (specific) to cornea (general). The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.

	s	slabel	user_slabel	o	olabel	user_olabel	row_number	deltaIC
0	UBERON:0004923	organ component layer	mucosa of the lip	UBERON:0003729	mouth mucosa	mouth mucosa	31	23.2771
4	UBERON:0013475	gustatory gland	gustatory gland (Von Ebner's gland)	UBERON:0001830	minor salivary gland	minor salivary gland	92	nan

Relationship CT-CT report

In the case of the CT-CT relationship, for each couple of terms, we verify for sub class of, part of and overlaps in the source ontologies. The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.

No issues found.

Relationship CT-AS report

In the case of the AS-CT relationship, for each couple of terms, we verify for connected to and has part in the source ontologies.

	s	slabel	user_slabel	o	olabel	user_olabel	row_number	deltaIC
1	CL:4052048	intercalated cell of salivary gland	intercalated duct epithelial cell	UBERON:0035046	parotid gland intercalated duct	intercalated duct	50	nan
2	CL:4052049	striated cell of salivary gland	striated duct epithelial cell	UBERON:0035047	parotid gland striated duct	striated duct	51	nan
3	CL:4052048	intercalated cell of salivary gland	intercalated duct epithelial cell	UBERON:0001838	sublingual duct	intercalated duct	67	nan

ASCT+B Validation Reports for Mouth (2026-04-01)

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