ASCT+B Validation Reports for Small_intestine (2025-05-22)
Table of contents
- Invalid terms
- Relationship reports
- New CL terms
- New UBERON terms
- Informative reports (valid relationships)
Invalid terms
These are the reports related to issues in the terms found in the ASCT+B table. We validate only CL, UBERON and PCL terms.
Terms not found
This report provides a list of terms not found neither in UBERON nor in CL. Please remove these terms from the ASCT+B table - disconsider this message if a term was recently added to the ontology.
- No issues found.
Typos or punctuation mistakes
This report provides a general quality check of the terms used in the ASCT+B table. Typos, font case (upper case), punctuation mistakes in IDs: two colons, spaces, underscore instead of a colon.
- No issues found.
Different labels
This report provides a list of terms having different names/labels found in the ontology and related to the one found in the ASCT+B table. Make sure to add the term's name/label in the column AS/N/LABEL or CT/N/LABEL. If the SME wants to give another name/label, please use the column AS/N or CT/N. N is the number in the column.
If the term's name/label and the name/label given by SME are too different, please make sure the term ID and its name/label are matching in OLS.
If the name/label in the ontology contains obsolete, please look into OLS, clicking on the term ID, for its replacement.
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The term CL:0000212 has a different name/label in the source ontology in the following 3 rows 58, 226, 309. The name/label in the ASCT+B table is absorptive cell and the one in the ontology is obsolete absorptive cell. For reference, the given name/label by SMEs is absorptive. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.
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The term CL:0000186 has a different name/label in the source ontology in the following 2 rows 232, 315. The name/label in the ASCT+B table is myofibroblast and the one in the ontology is myofibroblast cell. For reference, the given name/label by SMEs is myofibroblasts. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.
Blank ontology ID
This report provides a list of blank spreadsheet cells that often mean no ontology mapping found by the author. However, in some cases, a term with a synonym already exists. Please search in OLS.
You can find more information on the New CL terms or New UBERON terms reports.
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No term id was found for the name/label serosa in the following 18 rows 52, 53, 54, 136, 137, 138, 178, 179, 180, 220, 221, 222, 303, 304, 305, 344, 345, 346.
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No term id was found for the name/label BCHE (butyrylcholinesterase) cell in the following 1 row 62.
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No term id was found for the name/label lymphatic in the following 4 rows 64, 84, 251, 334.
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No term id was found for the name/label nerve in the following 2 rows 67, 85.
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No term id was found for the name/label CD4+ T in the following 3 rows 71, 238, 321.
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No term id was found for the name/label regulatory CD4+ T in the following 3 rows 72, 239, 322.
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No term id was found for the name/label CD8+ T in the following 3 rows 73, 240, 323.
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No term id was found for the name/label nerves in the following 11 rows 82, 234, 249, 252, 258, 259, 317, 332, 335, 341, 342.
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No term id was found for the name/label endoethlial in the following 1 row 83.
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No term id was found for the name/label muscle in the following 9 rows 86, 248, 253, 254, 260, 331, 336, 337, 343.
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No term id was found for the name/label mucosa in the following 107 rows 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331.
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No term id was found for the name/label submucosa in the following 23 rows 124, 125, 126, 127, 128, 166, 167, 168, 169, 170, 208, 209, 210, 211, 212, 291, 292, 293, 332, 333, 334, 335, 336.
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No term id was found for the name/label muscularis propria in the following 14 rows 129, 130, 131, 132, 133, 134, 135, 171, 172, 173, 174, 175, 176, 177.
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No term id was found for the name/label Lamina propria/Gut associated lymphoid tissue (GALT) in the following 55 rows 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330.
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No term id was found for the name/label lymphatics in the following 2 rows 231, 314.
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No term id was found for the name/label myenteric plexus of Auerbach in the following 6 rows 259, 260, 301, 302, 342, 343.
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No term id was found for the name/label connective tissue in the following 4 rows 262, 263, 303, 304.
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No term id was found for the name/label muscularis mucosa in the following 2 rows 290, 331.
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No term id was found for the name/label submucosal plexus of Meissner in the following 4 rows 294, 295, 335, 336.
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No term id was found for the name/label muscularis externa in the following 14 rows 296, 297, 298, 299, 300, 301, 302, 337, 338, 339, 340, 341, 342, 343.
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No term id was found for the name/label circular/longitudinal muscle in the following 10 rows 296, 297, 298, 299, 300, 337, 338, 339, 340, 341.
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No term id was found for the name/label Epithelium in the following 7 rows 306, 307, 308, 309, 310, 311, 312.
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No term id was found for the name/label epithelial stem cells in the following 1 row 306.
Blank ontology ID missing parent
This report provides a list of CT terms with blank ontology ID without an upper term from Cell Ontology. Please, create an upper level in the ASCT+B table and add an upper term for them. Please, make sure the term without ontology ID doesn't exist in the ontology.
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The term BCHE (butyrylcholinesterase) cell without ontology ID has no parent that is from the CL ontology in the following 1 row 62.
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The term lymphatic without ontology ID has no parent that is from the CL ontology in the following 3 rows 64, 251, 334.
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The term nerve without ontology ID has no parent that is from the CL ontology in the following 2 rows 67, 85.
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The term CD4+ T without ontology ID has no parent that is from the CL ontology in the following 3 rows 71, 238, 321.
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The term regulatory CD4+ T without ontology ID has no parent that is from the CL ontology in the following 3 rows 72, 239, 322.
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The term CD8+ T without ontology ID has no parent that is from the CL ontology in the following 3 rows 73, 240, 323.
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The term muscle without ontology ID has no parent that is from the CL ontology in the following 9 rows 86, 248, 253, 254, 260, 331, 336, 337, 343.
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The term lymphatics without ontology ID has no parent that is from the CL ontology in the following 2 rows 231, 314.
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The term nerves without ontology ID has no parent that is from the CL ontology in the following 10 rows 234, 249, 252, 258, 259, 317, 332, 335, 341, 342.
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The term epithelial stem cells without ontology ID has no parent that is from the CL ontology in the following 1 row 306.
Terms from another ontology
This report provides a list of terms from another ontologies that we do not validate. Foundational Model of Anatomy (FMA) ontology IDs are provided when an adequate term is not found in UBERON. Same case for Anatomic Ontology for Human Lung Maturation (LMHA) and Interlex IDs (ILX) from Stimulating Peripheral Activity to Relieve Conditions (SPARC). You can request cross-database request the same way a new term request. Please be sure if a term with a related synonym is already in the source ontologies CL or UBERON or PCL.
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The term FMA:17101 in the following 27 rows 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39 is from another ontology that is not validated in this process.
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The term FMA:17107 in the following 5 rows 40, 41, 42, 43, 44 is from another ontology that is not validated in this process.
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The term FMA:17113 in the following 7 rows 45, 46, 47, 48, 49, 50, 51 is from another ontology that is not validated in this process.
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The term FMA:14926 in the following 42 rows 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95, 96 is from another ontology that is not validated in this process.
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The term FMA:14928 in the following 42 rows 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138 is from another ontology that is not validated in this process.
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The term FMA:14929 in the following 42 rows 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180 is from another ontology that is not validated in this process.
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The term FMA:14930 in the following 42 rows 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222 is from another ontology that is not validated in this process.
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The term FMA:17116 in the following 7 rows 213, 214, 215, 216, 217, 218, 219 is from another ontology that is not validated in this process.
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The term FMA:14966 in the following 41 rows 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345, 346 is from another ontology that is not validated in this process.
Relationship reports
These reports are other representations of the ASCT+B table. We split each row into pairs with adjacent terms, resulting in a table with two primary columns, object (o), left side and subject (s), right side. The experts' labels for the subject and object are in the columns user_slabel and user_olabel. The other columns are the subject label (s_label) and object label (o_label), the label from the source ontologies.
The report means it could not find a partonomy relationship in the source ontologies, but it doesn't mean this relationship is entirely invalid. In some cases, the pair is in the inverse order. In other cases, the relationship is missing in the source ontologies. Finally, how it was modelled in the ASCT+B table is not aligned with the ontologies sources and needs a more general discussion.
How to read a table entry
In the ASCT+B table
| AS/2 | AS/2/LABEL | AS/2/ID | AS/3 | AS/3/LABEL | AS/3/ID |
|---|---|---|---|---|---|
| lens | lens | UBERON:0000965 | ciliary zonules | suspensory ligament of lens | UBERON:0006762 |
In the Relationship Report
| s | slabel | user_slabel | o | olabel | user_olabel |
|---|---|---|---|---|---|
| UBERON:0006762 | suspensory ligament of lens | ciliary zonules | UBERON:0000965 | lens | lens |
Relationship AS-AS report
This table contains terms for anatomical structures that are related to each other according to the ASCT+B table but are not related to each other in source ontologies via one of the relation types we consider valid for ASCT+B tables. Valid relationships are: part_of, e.g. corneal endothelium part_of cornea; subClassOf, e.g. left kidney subClassOf (is_a) kidney; and overlaps (has some part in), e.g. ureter overlaps kidney; connected_to, e.g. TBA. part_of and subClassOf relationships should be specific to general, e.g. left kidney (specific) to kidney (general); corneal endothelium (specific) to cornea (general). The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.
| s | slabel | user_slabel | o | olabel | user_olabel | row_number | deltaIC | |
|---|---|---|---|---|---|---|---|---|
| 28 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 239 | 10.9844 |
| 29 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 229 | 10.9844 |
| 30 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 230 | 10.9844 |
| 31 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 231 | 10.9844 |
| 32 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 232 | 10.9844 |
| 33 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 248 | 10.9844 |
| 34 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 247 | 10.9844 |
| 35 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 233 | 10.9844 |
| 36 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 246 | 10.9844 |
| 37 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 245 | 10.9844 |
| 38 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 240 | 10.9844 |
| 39 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 234 | 10.9844 |
| 40 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 244 | 10.9844 |
| 41 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 235 | 10.9844 |
| 42 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 243 | 10.9844 |
| 43 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 236 | 10.9844 |
| 44 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 242 | 10.9844 |
| 45 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 237 | 10.9844 |
| 46 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 228 | 10.9844 |
| 47 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 238 | 10.9844 |
| 48 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 241 | 10.9844 |
| 49 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 223 | 10.9844 |
| 50 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 227 | 10.9844 |
| 51 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 224 | 10.9844 |
| 52 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 226 | 10.9844 |
| 53 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000399 | jejunal mucosa | mucosa | 225 | 10.9844 |
| 54 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 290 | 10.0427 |
| 55 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 289 | 10.0427 |
| 56 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 288 | 10.0427 |
| 57 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 287 | 10.0427 |
| 58 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 281 | 10.0427 |
| 59 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 286 | 10.0427 |
| 60 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 285 | 10.0427 |
| 61 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 267 | 10.0427 |
| 62 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 284 | 10.0427 |
| 63 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 268 | 10.0427 |
| 64 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 283 | 10.0427 |
| 65 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 269 | 10.0427 |
| 66 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 266 | 10.0427 |
| 67 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 282 | 10.0427 |
| 68 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 274 | 10.0427 |
| 69 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 275 | 10.0427 |
| 70 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 265 | 10.0427 |
| 71 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 271 | 10.0427 |
| 72 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 272 | 10.0427 |
| 73 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 273 | 10.0427 |
| 74 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 280 | 10.0427 |
| 75 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 264 | 10.0427 |
| 76 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 270 | 10.0427 |
| 77 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 276 | 10.0427 |
| 78 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 277 | 10.0427 |
| 79 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 278 | 10.0427 |
| 80 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000331 | ileal mucosa | mucosa | 279 | 10.0427 |
| 86 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 55 | 4.46676 |
| 87 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 69 | 4.46676 |
| 88 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 60 | 4.46676 |
| 89 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 62 | 4.46676 |
| 90 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 63 | 4.46676 |
| 91 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 64 | 4.46676 |
| 92 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 65 | 4.46676 |
| 93 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 66 | 4.46676 |
| 94 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 67 | 4.46676 |
| 95 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 68 | 4.46676 |
| 96 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 59 | 4.46676 |
| 97 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 70 | 4.46676 |
| 98 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 71 | 4.46676 |
| 99 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 72 | 4.46676 |
| 100 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 73 | 4.46676 |
| 101 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 74 | 4.46676 |
| 102 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 75 | 4.46676 |
| 103 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 76 | 4.46676 |
| 104 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 77 | 4.46676 |
| 105 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 78 | 4.46676 |
| 106 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 79 | 4.46676 |
| 107 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 80 | 4.46676 |
| 108 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 81 | 4.46676 |
| 109 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 56 | 4.46676 |
| 110 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 58 | 4.46676 |
| 111 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 57 | 4.46676 |
| 112 | UBERON:0001213 | intestinal villus | intestinal villus | UBERON:0000320 | duodenal mucosa | mucosa | 61 | 4.46676 |
| 124 | UBERON:0012494 | muscularis mucosae of duodenum | muscularis mucosa | UBERON:0001213 | intestinal villus | intestinal villus | 81 | nan |
| 125 | UBERON:8410064 | submucous nerve plexus of small intestine | submucosal plexus of Meissner submucosal plexus (Meissners plexus, plexus of the submucosa, plexus submucosus) | UBERON:0003332 | submucosa of duodenum | submucosa | 85 | nan |
| 126 | UBERON:8410064 | submucous nerve plexus of small intestine | submucosal plexus of Meissner | UBERON:0003332 | submucosa of duodenum | submucosa | 86 | nan |
| 133 | UBERON:0016519 | muscularis mucosae of jejunum | muscularis mucosa | UBERON:0001213 | intestinal villus | intestinal villus | 248 | nan |
Relationship CT-CT report
In the case of the CT-CT relationship, for each couple of terms, we verify for sub class of, part of and overlaps in the source ontologies. The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.
- No issues found.
Relationship CT-AS report
In the case of the AS-CT relationship, for each couple of terms, we verify for connected to and has part in the source ontologies.
| s | slabel | user_slabel | o | olabel | user_olabel | row_number | deltaIC | |
|---|---|---|---|---|---|---|---|---|
| 0 | CL:0000115 | endothelial cell | endothelial | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 63 | 47.4626 |
| 1 | CL:0000115 | endothelial cell | endoethlial | UBERON:0003333 | submucosa of jejunum | submucosa | 250 | 47.4626 |
| 2 | CL:0000236 | B cell | B cell | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 69 | 44.2875 |
| 3 | CL:0000115 | endothelial cell | endothelial cells | UBERON:0003337 | serosa of jejunum | serosa | 263 | 42.9011 |
| 4 | CL:0000115 | endothelial cell | endothelial | UBERON:0012377 | muscle layer of jejunum | muscularis externa | 257 | 42.9011 |
| 5 | CL:0000057 | fibroblast | fibroblast | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 66 | 42.376 |
| 6 | CL:0000034 | stem cell | stem cell | UBERON:0008346 | duodenal epithelium | Epithelium | 61 | 39.8567 |
| 7 | CL:0000057 | fibroblast | fibroblasts | UBERON:0012377 | muscle layer of jejunum | muscularis externa | 256 | 37.8145 |
| 8 | CL:0000057 | fibroblast | fibroblasts | UBERON:0003337 | serosa of jejunum | serosa | 262 | 37.8145 |
| 9 | CL:0000115 | endothelial cell | endothelial cells | UBERON:0003336 | serosa of duodenum | serosa | 96 | 36.8712 |
| 10 | CL:0000451 | dendritic cell | dendritic cell (DC) | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 79 | 35.9841 |
| 11 | CL:0000235 | macrophage | macrophage | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 74 | 35.6129 |
| 12 | CL:0001065 | innate lymphoid cell | innate lyphoid cell (ILC) | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 80 | 32.1823 |
| 13 | CL:0000057 | fibroblast | fibroblasts | UBERON:0003336 | serosa of duodenum | serosa | 95 | 31.7846 |
| 14 | CL:0000623 | natural killer cell | natural killer (NK) cell | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 78 | 31.2254 |
| 15 | CL:0000775 | neutrophil | neutrophil | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 77 | 30.3711 |
| 16 | CL:0000097 | mast cell | mast cell | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 76 | 28.4996 |
| 17 | CL:0000786 | plasma cell | plasma | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 70 | 26.2507 |
| 18 | CL:0000771 | eosinophil | eosinophil | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 75 | 25.8745 |
| 19 | CL:0000036 | epithelial fate stem cell | epithelial stem cells | UBERON:0000400 | jejunal epithelium | Epithelium | 223 | 22.8585 |
| 20 | CL:0000236 | B cell | B cell | UBERON:0001213 | intestinal villus | intestinal villus | 319 | 16.4238 |
| 21 | CL:0000236 | B cell | B cell | UBERON:0001213 | intestinal villus | intestinal villus | 236 | 16.4238 |
| 22 | CL:0000186 | myofibroblast cell | myofibroblast | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 65 | 16.3526 |
| 23 | CL:0000163 | endocrine cell | endocrine | UBERON:0001213 | intestinal villus | intestinal villus | 308 | 15.387 |
| 24 | CL:0000682 | M cell of gut | M cell | UBERON:0015834 | duodenum lamina propria | Lamina propria/Gut associated lymphoid tissue (GALT) | 68 | 15.1528 |
| 25 | CL:0000584 | enterocyte | enterocytes | UBERON:0000400 | jejunal epithelium | Epithelium | 228 | 14.8153 |
| 26 | CL:0000057 | fibroblast | fibroblasts | UBERON:0001213 | intestinal villus | intestinal villus | 233 | 14.5122 |
| 27 | CL:0000057 | fibroblast | fibroblasts | UBERON:0001213 | intestinal villus | intestinal villus | 316 | 14.5122 |
| 81 | CL:0000451 | dendritic cell | DCs | UBERON:0001213 | intestinal villus | intestinal villus | 246 | 8.12039 |
| 82 | CL:0000451 | dendritic cell | DCs | UBERON:0001213 | intestinal villus | intestinal villus | 329 | 8.12039 |
| 83 | CL:0000235 | macrophage | macrophages | UBERON:0001213 | intestinal villus | intestinal villus | 324 | 7.74914 |
| 84 | CL:0000235 | macrophage | macrophages | UBERON:0001213 | intestinal villus | intestinal villus | 241 | 7.74914 |
| 85 | CL:0002088 | interstitial cell of Cajal | Interstitial cells of Cajal | UBERON:0012377 | muscle layer of jejunum | muscularis externa | 255 | 7.22973 |
| 113 | CL:0001065 | innate lymphoid cell | ILCs | UBERON:0001213 | intestinal villus | intestinal villus | 247 | 4.31859 |
| 114 | CL:0001065 | innate lymphoid cell | ILCs | UBERON:0001213 | intestinal villus | intestinal villus | 330 | 4.31859 |
| 115 | CL:0000623 | natural killer cell | NK cells | UBERON:0001213 | intestinal villus | intestinal villus | 245 | 3.36163 |
| 116 | CL:0000623 | natural killer cell | NK cells | UBERON:0001213 | intestinal villus | intestinal villus | 328 | 3.36163 |
| 117 | CL:0000775 | neutrophil | neutrophils | UBERON:0001213 | intestinal villus | intestinal villus | 327 | 2.50737 |
| 118 | CL:0000775 | neutrophil | neutrophils | UBERON:0001213 | intestinal villus | intestinal villus | 244 | 2.50737 |
| 119 | CL:0000097 | mast cell | mast cells | UBERON:0001213 | intestinal villus | intestinal villus | 243 | 0.635881 |
| 120 | CL:0000097 | mast cell | mast cells | UBERON:0001213 | intestinal villus | intestinal villus | 326 | 0.635881 |
| 121 | CL:1000344 | paneth cell of epithelium proper of small intestine | Paneth cell | UBERON:0008346 | duodenal epithelium | Epithelium | 55 | nan |
| 122 | CL:0009080 | tuft cell of small intestine | tuft cell | UBERON:0008346 | duodenal epithelium | Epithelium | 57 | nan |
| 123 | CL:0000212 | obsolete absorptive cell | absorptive | UBERON:0008346 | duodenal epithelium | Epithelium | 58 | nan |
| 127 | CL:1000344 | paneth cell of epithelium proper of small intestine | Paneth | UBERON:0000400 | jejunal epithelium | Epithelium | 224 | nan |
| 128 | CL:0000212 | obsolete absorptive cell | absorptive | UBERON:0000400 | jejunal epithelium | Epithelium | 226 | nan |
| 129 | CL:0009080 | tuft cell of small intestine | Tuft cells | UBERON:0000400 | jejunal epithelium | Epithelium | 229 | nan |
| 130 | CL:0000186 | myofibroblast cell | myofibroblasts | UBERON:0001213 | intestinal villus | intestinal villus | 232 | nan |
| 131 | CL:0000786 | plasma cell | plasma | UBERON:0001213 | intestinal villus | intestinal villus | 237 | nan |
| 132 | CL:0000771 | eosinophil | eosinophils | UBERON:0001213 | intestinal villus | intestinal villus | 242 | nan |
| 134 | CL:1000344 | paneth cell of epithelium proper of small intestine | Paneth | UBERON:0001213 | intestinal villus | intestinal villus | 307 | nan |
| 135 | CL:0000212 | obsolete absorptive cell | absorptive | UBERON:0001213 | intestinal villus | intestinal villus | 309 | nan |
| 136 | CL:0009080 | tuft cell of small intestine | Tuft cells | UBERON:0001213 | intestinal villus | intestinal villus | 312 | nan |
| 137 | CL:0000186 | myofibroblast cell | myofibroblasts | UBERON:0001213 | intestinal villus | intestinal villus | 315 | nan |
| 138 | CL:0000786 | plasma cell | plasma | UBERON:0001213 | intestinal villus | intestinal villus | 320 | nan |
| 139 | CL:0000771 | eosinophil | eosinophils | UBERON:0001213 | intestinal villus | intestinal villus | 325 | nan |