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ASCT+B Validation Reports for Small_intestine (2026-02-18)

Table of contents

Invalid terms

These are the reports related to issues in the terms found in the ASCT+B table. We validate only CL, UBERON and PCL terms.

Terms not found

This report provides a list of terms not found neither in UBERON nor in CL. Please remove these terms from the ASCT+B table - disconsider this message if a term was recently added to the ontology.

  • No issues found.

Typos or punctuation mistakes

This report provides a general quality check of the terms used in the ASCT+B table. Typos, font case (upper case), punctuation mistakes in IDs: two colons, spaces, underscore instead of a colon.

  • No issues found.

Different labels

This report provides a list of terms having different names/labels found in the ontology and related to the one found in the ASCT+B table. Make sure to add the term's name/label in the column AS/N/LABEL or CT/N/LABEL. If the SME wants to give another name/label, please use the column AS/N or CT/N. N is the number in the column.

If the term's name/label and the name/label given by SME are too different, please make sure the term ID and its name/label are matching in OLS.

If the name/label in the ontology contains obsolete, please look into OLS, clicking on the term ID, for its replacement.

  1. The term CL:0000212 has a different name/label in the source ontology in the following 3 rows 57, 225, 308. The name/label in the ASCT+B table is absorptive cell and the one in the ontology is obsolete absorptive cell. For reference, the given name/label by SMEs is absorptive. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

  2. The term CL:0000186 has a different name/label in the source ontology in the following 2 rows 231, 314. The name/label in the ASCT+B table is myofibroblast and the one in the ontology is myofibroblast cell. For reference, the given name/label by SMEs is myofibroblasts. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

Blank ontology ID

This report provides a list of blank spreadsheet cells that often mean no ontology mapping found by the author. However, in some cases, a term with a synonym already exists. Please search in OLS.

You can find more information on the New CL terms or New UBERON terms reports.

  1. No term id was found for the name/label serosa in the following 18 rows 51, 52, 53, 135, 136, 137, 177, 178, 179, 219, 220, 221, 302, 303, 304, 343, 344, 345.

  2. No term id was found for the name/label BCHE (butyrylcholinesterase) cell in the following 1 row 61.

  3. No term id was found for the name/label lymphatic in the following 4 rows 63, 83, 250, 333.

  4. No term id was found for the name/label regulatory CD4+ T in the following 3 rows 71, 238, 321.

  5. No term id was found for the name/label nerves in the following 1 row 81.

  6. No term id was found for the name/label endoethlial in the following 1 row 82.

  7. No term id was found for the name/label mucosa in the following 107 rows 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330.

  8. No term id was found for the name/label submucosa in the following 23 rows 123, 124, 125, 126, 127, 165, 166, 167, 168, 169, 207, 208, 209, 210, 211, 290, 291, 292, 331, 332, 333, 334, 335.

  9. No term id was found for the name/label muscularis propria in the following 14 rows 128, 129, 130, 131, 132, 133, 134, 170, 171, 172, 173, 174, 175, 176.

  10. No term id was found for the name/label Lamina propria/Gut associated lymphoid tissue (GALT) in the following 55 rows 229, 230, 231, 232, 233, 234, 235, 236, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 270, 271, 272, 273, 274, 275, 276, 277, 278, 279, 280, 281, 282, 283, 284, 285, 286, 287, 288, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329.

  11. No term id was found for the name/label lymphatics in the following 2 rows 230, 313.

  12. No term id was found for the name/label myenteric plexus of Auerbach in the following 6 rows 258, 259, 300, 301, 341, 342.

  13. No term id was found for the name/label connective tissue in the following 4 rows 261, 262, 302, 303.

  14. No term id was found for the name/label muscularis mucosa in the following 2 rows 289, 330.

  15. No term id was found for the name/label submucosal plexus of Meissner in the following 4 rows 293, 294, 334, 335.

  16. No term id was found for the name/label muscularis externa in the following 14 rows 295, 296, 297, 298, 299, 300, 301, 336, 337, 338, 339, 340, 341, 342.

  17. No term id was found for the name/label circular/longitudinal muscle in the following 10 rows 295, 296, 297, 298, 299, 336, 337, 338, 339, 340.

  18. No term id was found for the name/label Epithelium in the following 7 rows 305, 306, 307, 308, 309, 310, 311.

Blank ontology ID missing parent

This report provides a list of CT terms with blank ontology ID without an upper term from Cell Ontology. Please, create an upper level in the ASCT+B table and add an upper term for them. Please, make sure the term without ontology ID doesn't exist in the ontology.

  1. The term BCHE (butyrylcholinesterase) cell without ontology ID has no parent that is from the CL ontology in the following 1 row 61.

  2. The term lymphatic without ontology ID has no parent that is from the CL ontology in the following 3 rows 63, 250, 333.

  3. The term regulatory CD4+ T without ontology ID has no parent that is from the CL ontology in the following 3 rows 71, 238, 321.

  4. The term lymphatics without ontology ID has no parent that is from the CL ontology in the following 2 rows 230, 313.

Terms from another ontology

This report provides a list of terms from another ontologies that we do not validate. Foundational Model of Anatomy (FMA) ontology IDs are provided when an adequate term is not found in UBERON. Same case for Anatomic Ontology for Human Lung Maturation (LMHA) and Interlex IDs (ILX) from Stimulating Peripheral Activity to Relieve Conditions (SPARC). You can request cross-database request the same way a new term request. Please be sure if a term with a related synonym is already in the source ontologies CL or UBERON or PCL.

  1. The term FMA:17101 in the following 27 rows 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38 is from another ontology that is not validated in this process.

  2. The term FMA:17107 in the following 5 rows 39, 40, 41, 42, 43 is from another ontology that is not validated in this process.

  3. The term FMA:17113 in the following 7 rows 44, 45, 46, 47, 48, 49, 50 is from another ontology that is not validated in this process.

  4. The term FMA:14926 in the following 42 rows 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95 is from another ontology that is not validated in this process.

  5. The term FMA:14928 in the following 42 rows 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137 is from another ontology that is not validated in this process.

  6. The term FMA:14929 in the following 42 rows 138, 139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179 is from another ontology that is not validated in this process.

  7. The term FMA:14930 in the following 42 rows 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221 is from another ontology that is not validated in this process.

  8. The term FMA:17116 in the following 7 rows 212, 213, 214, 215, 216, 217, 218 is from another ontology that is not validated in this process.

  9. The term FMA:14966 in the following 41 rows 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 318, 319, 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331, 332, 333, 334, 335, 336, 337, 338, 339, 340, 341, 342, 343, 344, 345 is from another ontology that is not validated in this process.

Relationship reports

These reports are other representations of the ASCT+B table. We split each row into pairs with adjacent terms, resulting in a table with two primary columns, object (o), left side and subject (s), right side. The experts' labels for the subject and object are in the columns user_slabel and user_olabel. The other columns are the subject label (s_label) and object label (o_label), the label from the source ontologies.

The report means it could not find a partonomy relationship in the source ontologies, but it doesn't mean this relationship is entirely invalid. In some cases, the pair is in the inverse order. In other cases, the relationship is missing in the source ontologies. Finally, how it was modelled in the ASCT+B table is not aligned with the ontologies sources and needs a more general discussion.

How to read a table entry

In the ASCT+B table

AS/2 AS/2/LABEL AS/2/ID AS/3 AS/3/LABEL AS/3/ID
lens lens UBERON:0000965 ciliary zonules suspensory ligament of lens UBERON:0006762

In the Relationship Report

s slabel user_slabel o olabel user_olabel
UBERON:0006762 suspensory ligament of lens ciliary zonules UBERON:0000965 lens lens

Relationship AS-AS report

This table contains terms for anatomical structures that are related to each other according to the ASCT+B table but are not related to each other in source ontologies via one of the relation types we consider valid for ASCT+B tables. Valid relationships are: part_of, e.g. corneal endothelium part_of cornea; subClassOf, e.g. left kidney subClassOf (is_a) kidney; and overlaps (has some part in), e.g. ureter overlaps kidney; connected_to, e.g. TBA. part_of and subClassOf relationships should be specific to general, e.g. left kidney (specific) to kidney (general); corneal endothelium (specific) to cornea (general). The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.

s slabel user_slabel o olabel user_olabel row_number deltaIC
40 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 233 11.7241
41 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 234 11.7241
42 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 235 11.7241
43 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 236 11.7241
44 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 243 11.7241
45 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 244 11.7241
46 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 237 11.7241
47 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 238 11.7241
48 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 247 11.7241
49 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 239 11.7241
50 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 246 11.7241
51 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 240 11.7241
52 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 245 11.7241
53 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 241 11.7241
54 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 231 11.7241
55 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 242 11.7241
56 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 232 11.7241
57 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 223 11.7241
58 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 230 11.7241
59 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 225 11.7241
60 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 222 11.7241
61 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 224 11.7241
62 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 229 11.7241
63 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 226 11.7241
64 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 227 11.7241
65 UBERON:0001213 intestinal villus intestinal villus UBERON:0000399 jejunal mucosa mucosa 228 11.7241
66 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 264 10.7809
67 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 263 10.7809
68 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 280 10.7809
69 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 288 10.7809
70 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 287 10.7809
71 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 286 10.7809
72 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 285 10.7809
73 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 284 10.7809
74 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 283 10.7809
75 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 282 10.7809
76 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 267 10.7809
77 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 281 10.7809
78 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 289 10.7809
79 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 279 10.7809
80 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 268 10.7809
81 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 270 10.7809
82 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 266 10.7809
83 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 272 10.7809
84 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 271 10.7809
85 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 273 10.7809
86 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 274 10.7809
87 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 265 10.7809
88 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 275 10.7809
89 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 276 10.7809
90 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 277 10.7809
91 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 278 10.7809
92 UBERON:0001213 intestinal villus intestinal villus UBERON:0000331 ileal mucosa mucosa 269 10.7809
100 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 67 4.83032
101 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 70 4.83032
102 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 56 4.83032
103 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 57 4.83032
104 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 58 4.83032
105 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 59 4.83032
106 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 60 4.83032
107 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 61 4.83032
108 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 62 4.83032
109 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 63 4.83032
110 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 64 4.83032
111 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 65 4.83032
112 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 66 4.83032
113 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 68 4.83032
114 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 69 4.83032
115 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 54 4.83032
116 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 71 4.83032
117 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 77 4.83032
118 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 55 4.83032
119 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 80 4.83032
120 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 72 4.83032
121 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 78 4.83032
122 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 79 4.83032
123 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 76 4.83032
124 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 75 4.83032
125 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 74 4.83032
126 UBERON:0001213 intestinal villus intestinal villus UBERON:0000320 duodenal mucosa mucosa 73 4.83032
139 UBERON:0012494 muscularis mucosae of duodenum muscularis mucosa UBERON:0001213 intestinal villus intestinal villus 80 nan
140 UBERON:8410064 submucous nerve plexus of small intestine submucosal plexus of Meissner submucosal plexus (Meissners plexus, plexus of the submucosa, plexus submucosus) UBERON:0003332 submucosa of duodenum submucosa 84 nan
141 UBERON:8410064 submucous nerve plexus of small intestine submucosal plexus of Meissner UBERON:0003332 submucosa of duodenum submucosa 85 nan
149 UBERON:0016519 muscularis mucosae of jejunum muscularis mucosa UBERON:0001213 intestinal villus intestinal villus 247 nan

Relationship CT-CT report

In the case of the CT-CT relationship, for each couple of terms, we verify for sub class of, part of and overlaps in the source ontologies. The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.

  • No issues found.

Relationship CT-AS report

In the case of the AS-CT relationship, for each couple of terms, we verify for connected to and has part in the source ontologies.

s slabel user_slabel o olabel user_olabel row_number deltaIC
0 CL:0000540 neuron nerves UBERON:0003333 submucosa of jejunum submucosa 248 68.5252
1 CL:0000540 neuron nerves UBERON:0003333 submucosa of jejunum submucosa 251 68.5252
2 CL:0000540 neuron nerve UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 66 68.5252
3 CL:0000540 neuron nerves UBERON:0012377 muscle layer of jejunum muscularis externa 258 63.9568
4 CL:0000540 neuron nerves UBERON:0012377 muscle layer of jejunum muscularis externa 257 63.9568
5 CL:0000187 muscle cell muscle UBERON:8410064 submucous nerve plexus of small intestine submucosal plexus of Meissner 85 54.1524
6 CL:0000187 muscle cell muscle UBERON:0003333 submucosa of jejunum submucosa 252 54.1524
7 CL:0000115 endothelial cell endoethlial UBERON:0003333 submucosa of jejunum submucosa 249 47.75
8 CL:0000115 endothelial cell endothelial UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 62 47.75
9 CL:0000034 stem cell stem cell UBERON:0008346 duodenal epithelium Epithelium 60 47.0256
10 CL:0000236 B cell B cell UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 68 44.355
11 CL:0000115 endothelial cell endothelial UBERON:0012377 muscle layer of jejunum muscularis externa 256 43.1816
12 CL:0000115 endothelial cell endothelial cells UBERON:0003337 serosa of jejunum serosa 262 43.1816
13 CL:0000057 fibroblast fibroblast UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 65 42.377
14 CL:0000540 neuron nerves UBERON:0001213 intestinal villus intestinal villus 316 39.896
15 CL:0000540 neuron nerves UBERON:0001213 intestinal villus intestinal villus 233 39.896
16 CL:0000057 fibroblast fibroblasts UBERON:0012377 muscle layer of jejunum muscularis externa 255 37.8086
17 CL:0000057 fibroblast fibroblasts UBERON:0003337 serosa of jejunum serosa 261 37.8086
18 CL:0000115 endothelial cell endothelial cells UBERON:0003336 serosa of duodenum serosa 95 37.1425
19 CL:0000451 dendritic cell dendritic cell (DC) UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 78 35.955
20 CL:0000235 macrophage macrophage UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 73 35.608
21 CL:0000624 CD4-positive, alpha-beta T cell CD4+ T UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 70 34.189
22 CL:0001065 innate lymphoid cell innate lyphoid cell (ILC) UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 79 32.2313
23 CL:0000057 fibroblast fibroblasts UBERON:0003336 serosa of duodenum serosa 94 31.7695
24 CL:0000625 CD8-positive, alpha-beta T cell CD8+ T UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 72 31.33
25 CL:0000623 natural killer cell natural killer (NK) cell UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 77 31.2729
26 CL:0000775 neutrophil neutrophil UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 76 30.4174
27 CL:0000097 mast cell mast cell UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 75 28.543
28 CL:0000786 plasma cell plasma UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 69 26.2906
29 CL:0000771 eosinophil eosinophil UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 74 25.9139
30 CL:0000187 muscle cell muscle UBERON:0001213 intestinal villus intestinal villus 330 25.5232
31 CL:0000036 epithelial fate stem cell epithelial stem cells UBERON:0000400 jejunal epithelium Epithelium 222 22.7903
32 CL:0000186 myofibroblast cell myofibroblast UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 64 16.3775
33 CL:0000236 B cell B cell UBERON:0001213 intestinal villus intestinal villus 318 15.7258
34 CL:0000236 B cell B cell UBERON:0001213 intestinal villus intestinal villus 235 15.7258
35 CL:0000682 M cell of gut M cell UBERON:0015834 duodenum lamina propria Lamina propria/Gut associated lymphoid tissue (GALT) 67 15.1759
36 CL:0000163 endocrine cell endocrine UBERON:0001213 intestinal villus intestinal villus 307 14.9318
37 CL:0000584 enterocyte enterocytes UBERON:0000400 jejunal epithelium Epithelium 227 14.8378
38 CL:0000057 fibroblast fibroblasts UBERON:0001213 intestinal villus intestinal villus 232 13.7479
39 CL:0000057 fibroblast fibroblasts UBERON:0001213 intestinal villus intestinal villus 315 13.7479
93 CL:0000451 dendritic cell DCs UBERON:0001213 intestinal villus intestinal villus 245 7.32578
94 CL:0000451 dendritic cell DCs UBERON:0001213 intestinal villus intestinal villus 328 7.32578
95 CL:0002088 interstitial cell of Cajal Interstitial cells of Cajal UBERON:0012377 muscle layer of jejunum muscularis externa 254 7.24074
96 CL:0000235 macrophage macrophages UBERON:0001213 intestinal villus intestinal villus 240 6.97882
97 CL:0000235 macrophage macrophages UBERON:0001213 intestinal villus intestinal villus 323 6.97882
98 CL:0000624 CD4-positive, alpha-beta T cell CD4+ T UBERON:0001213 intestinal villus intestinal villus 320 5.55987
99 CL:0000624 CD4-positive, alpha-beta T cell CD4+ T UBERON:0001213 intestinal villus intestinal villus 237 5.55987
127 CL:0001065 innate lymphoid cell ILCs UBERON:0001213 intestinal villus intestinal villus 329 3.60216
128 CL:0001065 innate lymphoid cell ILCs UBERON:0001213 intestinal villus intestinal villus 246 3.60216
129 CL:0000036 epithelial fate stem cell epithelial stem cells UBERON:0001213 intestinal villus intestinal villus 305 3.29792
130 CL:0000625 CD8-positive, alpha-beta T cell CD8+ T UBERON:0001213 intestinal villus intestinal villus 322 2.70081
131 CL:0000625 CD8-positive, alpha-beta T cell CD8+ T UBERON:0001213 intestinal villus intestinal villus 239 2.70081
132 CL:0000623 natural killer cell NK cells UBERON:0001213 intestinal villus intestinal villus 244 2.64375
133 CL:0000623 natural killer cell NK cells UBERON:0001213 intestinal villus intestinal villus 327 2.64375
134 CL:0000775 neutrophil neutrophils UBERON:0001213 intestinal villus intestinal villus 326 1.78818
135 CL:0000775 neutrophil neutrophils UBERON:0001213 intestinal villus intestinal villus 243 1.78818
136 CL:1000344 paneth cell of epithelium proper of small intestine Paneth cell UBERON:0008346 duodenal epithelium Epithelium 54 nan
137 CL:0009080 tuft cell of small intestine tuft cell UBERON:0008346 duodenal epithelium Epithelium 56 nan
138 CL:0000212 obsolete absorptive cell absorptive UBERON:0008346 duodenal epithelium Epithelium 57 nan
142 CL:1000344 paneth cell of epithelium proper of small intestine Paneth UBERON:0000400 jejunal epithelium Epithelium 223 nan
143 CL:0000212 obsolete absorptive cell absorptive UBERON:0000400 jejunal epithelium Epithelium 225 nan
144 CL:0009080 tuft cell of small intestine Tuft cells UBERON:0000400 jejunal epithelium Epithelium 228 nan
145 CL:0000186 myofibroblast cell myofibroblasts UBERON:0001213 intestinal villus intestinal villus 231 nan
146 CL:0000786 plasma cell plasma UBERON:0001213 intestinal villus intestinal villus 236 nan
147 CL:0000771 eosinophil eosinophils UBERON:0001213 intestinal villus intestinal villus 241 nan
148 CL:0000097 mast cell mast cells UBERON:0001213 intestinal villus intestinal villus 242 nan
150 CL:1000344 paneth cell of epithelium proper of small intestine Paneth UBERON:0001213 intestinal villus intestinal villus 306 nan
151 CL:0000212 obsolete absorptive cell absorptive UBERON:0001213 intestinal villus intestinal villus 308 nan
152 CL:0009080 tuft cell of small intestine Tuft cells UBERON:0001213 intestinal villus intestinal villus 311 nan
153 CL:0000186 myofibroblast cell myofibroblasts UBERON:0001213 intestinal villus intestinal villus 314 nan
154 CL:0000786 plasma cell plasma UBERON:0001213 intestinal villus intestinal villus 319 nan
155 CL:0000771 eosinophil eosinophils UBERON:0001213 intestinal villus intestinal villus 324 nan
156 CL:0000097 mast cell mast cells UBERON:0001213 intestinal villus intestinal villus 325 nan

New CL terms

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New UBERON terms

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Informative reports (valid relationships)

Indirect relationship

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Relationship AS has part CT

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