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ASCT+B Validation Reports for Spleen (2024-11-20)

Table of contents

Invalid terms

These are the reports related to issues in the terms found in the ASCT+B table. We validate only CL, UBERON and PCL terms.

Terms not found

This report provides a list of terms not found neither in UBERON nor in CL. Please remove these terms from the ASCT+B table - disconsider this message if a term was recently added to the ontology.

  • No issues found.

Typos or punctuation mistakes

This report provides a general quality check of the terms used in the ASCT+B table. Typos, font case (upper case), punctuation mistakes in IDs: two colons, spaces, underscore instead of a colon.

  1. It might have a typo in the term ADDED in the following 20 rows 72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91. The term id should have this pattern: UBERON:NNNNNNN or CL:NNNNNNN or PCL:NNNNNNN. The ontology name in upper case. N is a number, and it should have exactly 7 numbers after the colon. Please change it in the ASCT+B table.

Different labels

This report provides a list of terms having different names/labels found in the ontology and related to the one found in the ASCT+B table. Make sure to add the term's name/label in the column AS/N/LABEL or CT/N/LABEL. If the SME wants to give another name/label, please use the column AS/N or CT/N. N is the number in the column.

If the term's name/label and the name/label given by SME are too different, please make sure the term ID and its name/label are matching in OLS.

If the name/label in the ontology contains obsolete, please look into OLS, clicking on the term ID, for its replacement.

  1. The term CL:0000499 has a different name/label in the source ontology in the following 1 row 53. The name/label in the ASCT+B table is stromal cell _ and the one in the ontology is _stromal cell. For reference, the given name/label by SMEs is Stromal Cell. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

  2. The term CL:0002399 has a different name/label in the source ontology in the following 1 row 126. The name/label in the ASCT+B table is myeloid dendritic cell cDC2 and the one in the ontology is CD1c-positive myeloid dendritic cell. For reference, the given name/label by SMEs is cDC2 myeloid dendritic cell. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

  3. The term UBERON:0009967 has a different name/label in the source ontology in the following 2 rows 31, 32. The name/label in the ASCT+B table is splenic sinusoid and the one in the ontology is spleen venous sinus. For reference, the given name/label by SMEs is Splenic Sinusoid. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

  4. The term CL:0002394 has a different name/label in the source ontology in the following 1 row 125. The name/label in the ASCT+B table is myeloid dendritic cell cDC1 and the one in the ontology is CD141-positive myeloid dendritic cell. For reference, the given name/label by SMEs is cDC1 myeloid dendritic cell. Please correct it in the columns AS/N/LABEL or CT/N/LABEL in the ASCT+B table.

Blank ontology ID

This report provides a list of blank spreadsheet cells that often mean no ontology mapping found by the author. However, in some cases, a term with a synonym already exists. Please search in OLS.

You can find more information on the New CL terms or New UBERON terms reports.

  1. No term id was found for the name/label Catecholaminergic Neuron in the following 6 rows 13, 14, 98, 108, 134, 141.

  2. No term id was found for the name/label Adventitial Stromal Cell in the following 2 rows 19, 97.

  3. No term id was found for the name/label Arterial Capillary in the following 1 row 22.

  4. No term id was found for the name/label Sheathed Capillary in the following 8 rows 23, 24, 25, 26, 27, 28, 29, 53.

  5. No term id was found for the name/label Splenic Stromal Sheath Cell in the following 1 row 25.

  6. No term id was found for the name/label Ring Fiber in the following 1 row 30.

  7. No term id was found for the name/label Reticular Cell of splenic sinusoid in the following 1 row 30.

  8. No term id was found for the name/label Splenic Littoral Cell in the following 1 row 31.

  9. No term id was found for the name/label Splenic Red Pulp Stroma in the following 1 row 32.

  10. No term id was found for the name/label Splenic Red Pulp Stromal Cell in the following 1 row 32.

  11. No term id was found for the name/label Splenic venules in the following 1 row 34.

  12. No term id was found for the name/label B cell in the following 1 row 39.

  13. No term id was found for the name/label Red Pulp-White Pulp Border in the following 14 rows 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 92, 93, 94, 95.

  14. No term id was found for the name/label Splenic perifollicular zone macrophage in the following 1 row 52.

  15. No term id was found for the name/label DEC205+ DC in the following 3 rows 58, 65, 127.

  16. No term id was found for the name/label Central arteries in the following 1 row 59.

  17. No term id was found for the name/label White Pulp Lymphatic Vessels in the following 1 row 60.

  18. No term id was found for the name/label Mantle Zone B Cell in the following 1 row 72.

  19. No term id was found for the name/label Splenic Pericyte in the following 2 rows 76, 80.

  20. No term id was found for the name/label Inner PALS in the following 15 rows 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110.

  21. No term id was found for the name/label Interdigitating Dendritic Cells in the following 1 row 106.

  22. No term id was found for the name/label Splenic Smooth Muscle Cell in the following 1 row 110.

  23. No term id was found for the name/label Outer PALS in the following 8 rows 111, 112, 113, 114, 115, 116, 117, 118.

  24. No term id was found for the name/label Cytotoxic Memory T Cell in the following 1 row 119.

  25. No term id was found for the name/label Connective tissue in the following 1 row 136.

  26. No term id was found for the name/label Subcapsule in the following 1 row 137.

  27. No term id was found for the name/label Subcapsular Dendritic Cell in the following 1 row 137.

Blank ontology ID missing parent

This report provides a list of CT terms with blank ontology ID without an upper term from Cell Ontology. Please, create an upper level in the ASCT+B table and add an upper term for them. Please, make sure the term without ontology ID doesn't exist in the ontology.

  1. The term Catecholaminergic Neuron without ontology ID has no parent that is from the CL ontology in the following 6 rows 13, 14, 98, 108, 134, 141.

  2. The term Adventitial Stromal Cell without ontology ID has no parent that is from the CL ontology in the following 2 rows 19, 97.

  3. The term Splenic Stromal Sheath Cell without ontology ID has no parent that is from the CL ontology in the following 1 row 25.

  4. The term Reticular Cell of splenic sinusoid without ontology ID has no parent that is from the CL ontology in the following 1 row 30.

  5. The term Splenic Littoral Cell without ontology ID has no parent that is from the CL ontology in the following 1 row 31.

  6. The term Splenic Red Pulp Stromal Cell without ontology ID has no parent that is from the CL ontology in the following 1 row 32.

  7. The term B cell without ontology ID has no parent that is from the CL ontology in the following 1 row 39.

  8. The term Splenic perifollicular zone macrophage without ontology ID has no parent that is from the CL ontology in the following 1 row 52.

  9. The term DEC205+ DC without ontology ID has no parent that is from the CL ontology in the following 3 rows 58, 65, 127.

  10. The term Mantle Zone B Cell without ontology ID has no parent that is from the CL ontology in the following 1 row 72.

  11. The term Splenic Pericyte without ontology ID has no parent that is from the CL ontology in the following 2 rows 76, 80.

  12. The term Interdigitating Dendritic Cells without ontology ID has no parent that is from the CL ontology in the following 1 row 106.

  13. The term Splenic Smooth Muscle Cell without ontology ID has no parent that is from the CL ontology in the following 1 row 110.

  14. The term Cytotoxic Memory T Cell without ontology ID has no parent that is from the CL ontology in the following 1 row 119.

  15. The term Subcapsular Dendritic Cell without ontology ID has no parent that is from the CL ontology in the following 1 row 137.

Terms from another ontology

This report provides a list of terms from another ontologies that we do not validate. Foundational Model of Anatomy (FMA) ontology IDs are provided when an adequate term is not found in UBERON. Same case for Anatomic Ontology for Human Lung Maturation (LMHA) and Interlex IDs (ILX) from Stimulating Peripheral Activity to Relieve Conditions (SPARC). You can request cross-database request the same way a new term request. Please be sure if a term with a related synonym is already in the source ontologies CL or UBERON or PCL.

  • No issues found.

Relationship reports

These reports are other representations of the ASCT+B table. We split each row into pairs with adjacent terms, resulting in a table with two primary columns, object (o), left side and subject (s), right side. The experts' labels for the subject and object are in the columns user_slabel and user_olabel. The other columns are the subject label (s_label) and object label (o_label), the label from the source ontologies.

The report means it could not find a partonomy relationship in the source ontologies, but it doesn't mean this relationship is entirely invalid. In some cases, the pair is in the inverse order. In other cases, the relationship is missing in the source ontologies. Finally, how it was modelled in the ASCT+B table is not aligned with the ontologies sources and needs a more general discussion.

How to read a table entry

In the ASCT+B table

AS/2 AS/2/LABEL AS/2/ID AS/3 AS/3/LABEL AS/3/ID
lens lens UBERON:0000965 ciliary zonules suspensory ligament of lens UBERON:0006762

In the Relationship Report

s slabel user_slabel o olabel user_olabel
UBERON:0006762 suspensory ligament of lens ciliary zonules UBERON:0000965 lens lens

Relationship AS-AS report

This table contains terms for anatomical structures that are related to each other according to the ASCT+B table but are not related to each other in source ontologies via one of the relation types we consider valid for ASCT+B tables. Valid relationships are: part_of, e.g. corneal endothelium part_of cornea; subClassOf, e.g. left kidney subClassOf (is_a) kidney; and overlaps (has some part in), e.g. ureter overlaps kidney; connected_to, e.g. TBA. part_of and subClassOf relationships should be specific to general, e.g. left kidney (specific) to kidney (general); corneal endothelium (specific) to cornea (general). The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.

s slabel user_slabel o olabel user_olabel row_number deltaIC
7 UBERON:0001473 lymphatic vessel Lymphatic Vessels UBERON:0001248 hilum of spleen Hilum 135 34.1671
9 UBERON:0001473 lymphatic vessel Lymphatic Vessels UBERON:0004641 spleen capsule Capsule 138 31.495
14 UBERON:0001473 lymphatic vessel Lymphatic Vessels UBERON:0001265 trabecula of spleen Trabeculae 142 25.0312
51 UBERON:0003713 splenic vein Splenic Vein UBERON:0001248 hilum of spleen Hilum 133 8.25586
55 UBERON:0001265 trabecula of spleen Trabeculae UBERON:0004641 spleen capsule Capsule 139 6.46379
56 UBERON:0001265 trabecula of spleen Trabeculae UBERON:0004641 spleen capsule Capsule 140 6.46379
57 UBERON:0001265 trabecula of spleen Trabeculae UBERON:0004641 spleen capsule Capsule 141 6.46379
58 UBERON:0001265 trabecula of spleen Trabeculae UBERON:0004641 spleen capsule Capsule 142 6.46379
59 UBERON:0001265 trabecula of spleen Trabeculae UBERON:0004641 spleen capsule Capsule 143 6.46379
64 UBERON:0012373 Sympathetic nerve plexus Sympathetic nerves UBERON:0001248 hilum of spleen Hilum 134 4.56793
65 UBERON:0001194 splenic artery Splenic Artery UBERON:0001248 hilum of spleen Hilum 132 4.56793
74 UBERON:0001194 Splenic Artery Splenic Artery UBERON:1000023 spleen pulp Splenic Pulp 12 nan
76 UBERON:0001194 Splenic Artery Splenic Artery UBERON:1000023 spleen pulp Splenic Pulp 13 nan
77 UBERON:0012373 Sympathetic nerve plexus Sympathetic nerves UBERON:0001194 Splenic Artery Splenic Artery 13 nan
78 UBERON:0012373 Sympathetic nerve plexus Sympathetic nerves UBERON:0010401 Spleen central arteriole Spleen central arteriole 14 nan
79 UBERON:0003713 splenic vein Splenic Vein UBERON:0001250 red pulp of spleen Red Pulp 33 nan
113 UBERON:0012373 Sympathetic nerve plexus Sympathetic nerves UBERON:0001265 trabecula of spleen Trabeculae 141 nan

Relationship CT-CT report

In the case of the CT-CT relationship, for each couple of terms, we verify for sub class of, part of and overlaps in the source ontologies. The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.

  • No issues found.

Relationship CT-AS report

In the case of the AS-CT relationship, for each couple of terms, we verify for connected to and has part in the source ontologies.

s slabel user_slabel o olabel user_olabel row_number deltaIC
0 CL:0000499 stromal cell Splenic Stromal Cell (non-FRC/non-FDC) UBERON:0013132 Penicillar Arteriole Penicillar Arteriole 20 42.7647
1 CL:0000037 hematopoietic stem cell Hematopoetic Stem Cell UBERON:0001266 splenic cord Splenic Cord 36 41.3577
2 CL:0000192 smooth muscle cell Splenic Smooth Muscle Cell UBERON:0013132 Penicillar Arteriole Penicillar Arteriole 21 38.3158
3 CL:0000499 stromal cell Splenic Stromal Cell (non-FRC/non-FDC) UBERON:0001266 splenic cord Splenic Cord 47 38.1967
4 CL:0000499 stromal cell Splenic Stromal Cell (non-FRC/non-FDC) UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 124 35.5247
5 CL:0000499 stromal cell Stromal Cell UBERON:0005353 spleen perifollicular zone Perifollicular Zone 53 35.5247
6 CL:0000232 erythrocyte Erythrocytes UBERON:0001266 splenic cord Splenic Cord 38 35.0954
8 CL:0000232 erythrocyte Erythrocytes UBERON:0005353 spleen perifollicular zone Perifollicular Zone 49 32.4233
10 CL:0000233 platelet Platelet UBERON:0001266 splenic cord Splenic Cord 45 31.4394
11 CL:0000623 natural killer cell NK Cell UBERON:0001266 splenic cord Splenic Cord 46 26.2879
12 CL:0000625 CD8-positive, alpha-beta T cell CD8+ T Cell UBERON:0001266 splenic cord Splenic Cord 40 26.1647
13 CL:0000787 memory B cell Memory-Like B Cell UBERON:0013132 Penicillar Arteriole Penicillar Arteriole 17 26.1647
15 CL:0000818 transitional stage B cell Transitional Immature B Cells UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 118 24.3649
16 CL:0000818 transitional stage B cell Transitional Immature B Cells UBERON:0010421 spleen B cell corona Mantle Zone 73 24.3649
17 CL:0000623 natural killer cell NK Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 130 23.6158
18 CL:0000775 neutrophil Neutrophil UBERON:0005353 spleen perifollicular zone Perifollicular Zone 51 23.3034
19 CL:0000798 gamma-delta T cell Gamma/Delta T cells UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 131 22.2662
20 CL:0000786 plasma cell Plasma Cell UBERON:0001266 splenic cord Splenic Cord 42 21.72
21 CL:0000980 plasmablast Plasmablast UBERON:0001266 splenic cord Splenic Cord 43 21.3433
22 CL:0000492 CD4-positive helper T cell CD4+ T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 100 21.1243
23 CL:0000492 CD4-positive helper T cell CD4+ T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 112 21.1243
24 CL:0000499 stromal cell Splenic Stromal Cell (non-FRC/non-FDC) UBERON:0001251 Marginal Zone of Spleen Superficial Zone 88 19.925
25 CL:0000788 naive B Cell Naive B Cell UBERON:0013132 Penicillar Arteriole Penicillar Arteriole 16 19.4042
26 CL:0000909 CD8-positive, alpha-beta memory T cell Memory CD8+ T Cell UBERON:0001266 splenic cord Splenic Cord 41 19.0479
27 CL:0000972 class switched memory B cell Switched B Cell UBERON:0013132 Penicillar Arteriole Penicillar Arteriole 18 19.0479
28 CL:0000815 regulatory T cell T Regulatory Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 104 18.9247
29 CL:0000815 regulatory T cell T Regulatory Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 116 18.9247
30 CL:0000787 memory B cell Memory B Cell UBERON:0010421 spleen B cell corona Mantle Zone 78 18.9247
31 CL:0000980 plasmablast Plasmablast UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 129 18.6712
32 CL:0000909 CD8-positive, alpha-beta memory T cell Non-Cytotoxic CD8+ Memory T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 120 16.3758
33 CL:0002138 endothelial cell of lymphatic vessel Lymphatic Endothelium Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 109 15.9992
34 CL:0000897 CD4-positive, alpha-beta memory T cell CD4+ Memory T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 121 15.9992
35 CL:0000787 memory B cell Memory B Cell UBERON:0004041 spleen primary B follicle Primary Follicle 63 13.3409
36 CL:0000895 naive thymus-derived CD4-positive, alpha-beta T cell Naive CD4+ T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 99 12.8238
37 CL:0000895 naive thymus-derived CD4-positive, alpha-beta T cell Naive CD4+ T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 111 12.8238
38 CL:0000788 naive B cell Naive B Cell UBERON:0010421 spleen B cell corona Mantle Zone 77 12.1642
39 CL:0000900 naive thymus-derived CD8-positive, alpha-beta T cell Naive CD8+ T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 101 11.8079
40 CL:0000900 naive thymus-derived CD8-positive, alpha-beta T cell Naive CD8+ T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 113 11.8079
41 CL:0000669 pericyte Splenic Pericyte UBERON:0001250 red pulp of spleen Red Pulp 24 11.7343
42 CL:0000442 follicular dendritic cell Follicular Dendritic Cell (FDC) UBERON:0010421 spleen B cell corona Mantle Zone 79 11.0317
43 CL:0000442 follicular dendritic cell Follicular Dendritic Cell (FDC) UBERON:0010421 spleen B cell corona Mantle Zone 74 11.0317
44 CL:0000980 plasmablast Plasmablast UBERON:0005196 spleen germinal center Germinal Center 71 10.1088
45 CL:0000186 myofibroblast cell Myofibroblasts UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 122 9.13585
46 CL:0000794 CD8-positive, alpha-beta cytotoxic T cell Cytotoxic T Cells UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 103 9.13585
47 CL:0000186 myofibroblast cell Myofibroblast UBERON:0004641 spleen capsule Capsule 136 9.13585
48 CL:0000794 CD8-positive, alpha-beta cytotoxic T cell Cytotoxic T Cells UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 115 9.13585
49 CL:0000818 transitional stage B cell Transitional Immature B Cells UBERON:0001251 Marginal Zone of Spleen Superficial Zone 85 8.76523
50 CL:0000787 memory B cell Memory-Like B Cell UBERON:0001250 red pulp of spleen Red Pulp 28 8.31833
52 CL:0000775 neutrophil Neutrophil UBERON:0001251 Marginal Zone of Spleen Superficial Zone 93 7.70381
53 CL:1000413 endothelial cell of artery Blood Endothelial Cells UBERON:0001194 splenic artery Splenic Artery 132 7.23999
54 CL:0002543 vein endothelial cell Blood Endothelial Cells UBERON:0003713 splenic vein Splenic Vein 133 6.91846
60 CL:0000844 germinal center B cell Germinal Center B Cell UBERON:0005196 spleen germinal center Germinal Center 67 5.66883
61 CL:0000492 CD4-positive helper T cell CD4+ T cell UBERON:0001251 Marginal Zone of Spleen Superficial Zone 90 5.52469
62 CL:0000442 follicular dendritic cell Follicular Dendritic Cell (FDC) UBERON:0004041 spleen primary B follicle Primary Follicle 61 5.44791
63 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0013132 Penicillar Arteriole Penicillar Arteriole 15 4.56793
66 CL:0001056 dendritic cell, human Dendritic Cell UBERON:0001266 splenic cord Splenic Cord 44 4.56793
67 CL:0000786 plasma cell Plasma Cell UBERON:0001251 Marginal Zone of Spleen Superficial Zone 91 3.44827
68 CL:0000787 memory B cell Memory B Cell UBERON:0001251 Marginal Zone of Spleen Superficial Zone 83 3.32509
69 CL:0000186 myofibroblast cell Myofibroblast UBERON:0001265 trabecula of spleen Trabeculae 143 2.67207
70 CL:0000442 follicular dendritic cell Follicular Dendritic Cell (FDC) UBERON:0005196 spleen germinal center Germinal Center 66 2.46928
71 CL:0000788 naive B Cell Naive B Cell UBERON:0001250 red pulp of spleen Red Pulp 27 1.55783
72 CL:0000972 class switched memory B cell Switched B Cell UBERON:0001250 red pulp of spleen Red Pulp 29 1.20152
73 CL:0002038 T follicular helper cell T Follicular Helper Cell UBERON:0005196 spleen germinal center Germinal Center 68 0.573416
75 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0001194 Splenic Artery Splenic Artery 12 nan
80 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0003713 splenic vein Splenic Vein 33 nan
81 CL:0000874 splenic red pulp macrophage Red Pulp Macrophage UBERON:0001266 splenic cord Splenic Cord 35 nan
82 CL:0001055 CD14-positive, CD16-low monocyte Monocytes UBERON:0001266 splenic cord Splenic Cord 37 nan
83 CL:0001055 CD14-positive, CD16-low monocyte Monocytes UBERON:0005353 spleen perifollicular zone Perifollicular Zone 50 nan
84 CL:0002394 CD141-positive myeloid dendritic cell cDC1 myeloid dendritic cell UBERON:0005353 spleen perifollicular zone Perifollicular Zone 54 nan
85 CL:0002399 CD1c-positive myeloid dendritic cell cDC2 myeloid dendritic cell UBERON:0005353 spleen perifollicular zone Perifollicular Zone 55 nan
86 CL:0011031 monocyte-derived dendritic cell Monocyte-Derived DC UBERON:0005353 spleen perifollicular zone Perifollicular Zone 56 nan
87 CL:0001058 plasmacytoid dendritic cell, human Plasmacytoid Dendritic Cell UBERON:0005353 spleen perifollicular zone Perifollicular Zone 57 nan
88 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0001959 white pulp of spleen White Pulp 59 nan
89 CL:0002138 endothelial cell of lymphatic vessel Lymphatic Endothelium Cell UBERON:0001959 white pulp of spleen White Pulp 60 nan
90 CL:0000876 splenic white pulp macrophage Macrophage UBERON:0004041 spleen primary B follicle Primary Follicle 64 nan
91 CL:0009113 T follicular regulatory cell T Follicular Regulatory Cell UBERON:0005196 spleen germinal center Germinal Center 69 nan
92 CL:0000877 splenic tingible body macrophage Tingible Body Macrophage UBERON:0005196 spleen germinal center Germinal Center 70 nan
93 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0010421 spleen B cell corona Mantle Zone 75 nan
94 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0010421 spleen B cell corona Mantle Zone 81 nan
95 CL:0000972 class switched memory B cell Switched B Cell UBERON:0001251 Marginal Zone of Spleen Superficial Zone 82 nan
96 CL:0000442 follicular dendritic cell Follicular Dendritic Cell (FDC) UBERON:0001251 Marginal Zone of Spleen Superficial Zone 86 nan
97 CL:0001058 plasmacytoid dendritic cell, human Plasmacytoid Dendritic Cell UBERON:0001251 Marginal Zone of Spleen Superficial Zone 89 nan
98 CL:0001078 group 3 innate lymphoid cell, human Innate Lymphoid Cell (Type 3) UBERON:0001251 Marginal Zone of Spleen Superficial Zone 92 nan
99 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0001251 Marginal Zone of Spleen Superficial Zone 94 nan
100 CL:1000489 reticular cell of splenic cord Fibroblastic Reticular Cell (FRC) UBERON:0001251 Marginal Zone of Spleen Superficial Zone 95 nan
101 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0010401 spleen central arteriole Periarteriolar Lymphoid Sheath (PALS) 96 nan
102 CL:0001050 effector CD8-positive, alpha-beta T cell CD8+ T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 102 nan
103 CL:1000489 reticular cell of splenic cord Fibroblastic Reticular Cell (FRC) UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 105 nan
104 CL:0000876 splenic white pulp macrophage Macrophages UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 107 nan
105 CL:0001050 effector CD8-positive, alpha-beta T cell CD8+ T Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 114 nan
106 CL:1000489 reticular cell of splenic cord Fibroblastic Reticular Cell (FRC) UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 117 nan
107 CL:0001058 plasmacytoid dendritic cell, human Plasmacytoid Dendritic Cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 123 nan
108 CL:0002394 CD141-positive myeloid dendritic cell cDC1 myeloid dendritic cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 125 nan
109 CL:0002399 CD1c-positive myeloid dendritic cell cDC2 myeloid dendritic cell UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 126 nan
110 CL:0011031 monocyte-derived dendritic cell Monocyte-Derived DC UBERON:0001960 periarterial lymphatic sheath Periarteriolar Lymphoid Sheath (PALS) 128 nan
111 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0010399 Spleen Trabecular Artery Spleen Trabecular Artery 139 nan
112 CL:2000053 splenic endothelial cell Splenic endothelial cell UBERON:0010400 Spleen Trabecular Vein Spleen Trabecular Vein 140 nan

New CL terms

Report

New UBERON terms

Report

Informative reports (valid relationships)

Indirect relationship

Report

Relationship AS has part CT

Report