ASCT+B Validation Reports for Spleen (2024-12-25)
Table of contents
- Invalid terms
- Relationship reports
- New CL terms
- New UBERON terms
- Informative reports (valid relationships)
Invalid terms
These are the reports related to issues in the terms found in the ASCT+B table. We validate only CL, UBERON and PCL terms.
Terms not found
This report provides a list of terms not found neither in UBERON nor in CL. Please remove these terms from the ASCT+B table - disconsider this message if a term was recently added to the ontology.
- CL:0008034A
Typos or punctuation mistakes
This report provides a general quality check of the terms used in the ASCT+B table. Typos, font case (upper case), punctuation mistakes in IDs: two colons, spaces, underscore instead of a colon.
- It might have a typo in the term ADDED in the following 1 row 47. The term id should have this pattern: UBERON:NNNNNNN or CL:NNNNNNN or PCL:NNNNNNN. The ontology name in upper case. N is a number, and it should have exactly 7 numbers after the colon. Please change it in the ASCT+B table.
Different labels
This report provides a list of terms having different names/labels found in the ontology and related to the one found in the ASCT+B table. Make sure to add the term's name/label in the column AS/N/LABEL or CT/N/LABEL. If the SME wants to give another name/label, please use the column AS/N or CT/N. N is the number in the column.
If the term's name/label and the name/label given by SME are too different, please make sure the term ID and its name/label are matching in OLS.
If the name/label in the ontology contains obsolete, please look into OLS, clicking on the term ID, for its replacement.
- No issues found.
Blank ontology ID
This report provides a list of blank spreadsheet cells that often mean no ontology mapping found by the author. However, in some cases, a term with a synonym already exists. Please search in OLS.
You can find more information on the New CL terms or New UBERON terms reports.
-
No term id was found for the name/label Adventitial Stromal Cell in the following 2 rows 19, 97.
-
No term id was found for the name/label Splenic Stromal Cell (non-FRC/non-FDC) in the following 3 rows 20, 88, 124.
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No term id was found for the name/label Splenic Smooth Muscle Cell in the following 2 rows 21, 110.
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No term id was found for the name/label Arterial Capillary in the following 1 row 22.
-
No term id was found for the name/label Sheathed Capillary in the following 8 rows 23, 24, 25, 26, 27, 28, 29, 53.
-
No term id was found for the name/label Splenic Pericyte in the following 3 rows 24, 76, 80.
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No term id was found for the name/label Splenic Stromal Sheath Cell in the following 1 row 25.
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No term id was found for the name/label Ring Fiber in the following 1 row 30.
-
No term id was found for the name/label Reticular Cell of splenic sinusoid in the following 1 row 30.
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No term id was found for the name/label Splenic Littoral Cell in the following 1 row 31.
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No term id was found for the name/label Splenic Red Pulp Stroma in the following 1 row 32.
-
No term id was found for the name/label Splenic Red Pulp Stromal Cell in the following 1 row 32.
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No term id was found for the name/label Splenic venules in the following 1 row 34.
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No term id was found for the name/label Red Pulp-White Pulp Border in the following 24 rows 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95.
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No term id was found for the name/label Splenic perifollicular zone macrophage in the following 1 row 52.
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No term id was found for the name/label DEC205+ DC in the following 3 rows 58, 65, 127.
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No term id was found for the name/label Central arteries in the following 1 row 59.
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No term id was found for the name/label White Pulp Lymphatic Vessels in the following 1 row 60.
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No term id was found for the name/label Inner Mantle Zone in the following 5 rows 72, 73, 74, 75, 76.
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No term id was found for the name/label Mantle Zone B Cell in the following 1 row 72.
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No term id was found for the name/label Superficial Mantle Zone in the following 5 rows 77, 78, 79, 80, 81.
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No term id was found for the name/label Inner PALS in the following 15 rows 96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110.
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No term id was found for the name/label Interdigitating Dendritic Cells in the following 1 row 106.
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No term id was found for the name/label Outer PALS in the following 8 rows 111, 112, 113, 114, 115, 116, 117, 118.
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No term id was found for the name/label Connective tissue in the following 1 row 136.
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No term id was found for the name/label Subcapsule in the following 1 row 137.
-
No term id was found for the name/label Subcapsular Dendritic Cell in the following 1 row 137.
Blank ontology ID missing parent
This report provides a list of CT terms with blank ontology ID without an upper term from Cell Ontology. Please, create an upper level in the ASCT+B table and add an upper term for them. Please, make sure the term without ontology ID doesn't exist in the ontology.
- No issues found.
Terms from another ontology
This report provides a list of terms from another ontologies that we do not validate. Foundational Model of Anatomy (FMA) ontology IDs are provided when an adequate term is not found in UBERON. Same case for Anatomic Ontology for Human Lung Maturation (LMHA) and Interlex IDs (ILX) from Stimulating Peripheral Activity to Relieve Conditions (SPARC). You can request cross-database request the same way a new term request. Please be sure if a term with a related synonym is already in the source ontologies CL or UBERON or PCL.
- No issues found.
Relationship reports
These reports are other representations of the ASCT+B table. We split each row into pairs with adjacent terms, resulting in a table with two primary columns, object (o), left side and subject (s), right side. The experts' labels for the subject and object are in the columns user_slabel and user_olabel. The other columns are the subject label (s_label) and object label (o_label), the label from the source ontologies.
The report means it could not find a partonomy relationship in the source ontologies, but it doesn't mean this relationship is entirely invalid. In some cases, the pair is in the inverse order. In other cases, the relationship is missing in the source ontologies. Finally, how it was modelled in the ASCT+B table is not aligned with the ontologies sources and needs a more general discussion.
How to read a table entry
In the ASCT+B table
| AS/2 | AS/2/LABEL | AS/2/ID | AS/3 | AS/3/LABEL | AS/3/ID |
|---|---|---|---|---|---|
| lens | lens | UBERON:0000965 | ciliary zonules | suspensory ligament of lens | UBERON:0006762 |
In the Relationship Report
| s | slabel | user_slabel | o | olabel | user_olabel |
|---|---|---|---|---|---|
| UBERON:0006762 | suspensory ligament of lens | ciliary zonules | UBERON:0000965 | lens | lens |
Relationship AS-AS report
This table contains terms for anatomical structures that are related to each other according to the ASCT+B table but are not related to each other in source ontologies via one of the relation types we consider valid for ASCT+B tables. Valid relationships are: part_of, e.g. corneal endothelium part_of cornea; subClassOf, e.g. left kidney subClassOf (is_a) kidney; and overlaps (has some part in), e.g. ureter overlaps kidney; connected_to, e.g. TBA. part_of and subClassOf relationships should be specific to general, e.g. left kidney (specific) to kidney (general); corneal endothelium (specific) to cornea (general). The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.
| s | slabel | user_slabel | o | olabel | user_olabel | row_number | deltaIC | |
|---|---|---|---|---|---|---|---|---|
| 13 | UBERON:0001473 | lymphatic vessel | Lymphatic Vessels | UBERON:0001248 | hilum of spleen | Hilum | 135 | 34.1556 |
| 16 | UBERON:0001473 | lymphatic vessel | Lymphatic Vessels | UBERON:0004641 | spleen capsule | Capsule | 138 | 31.4844 |
| 28 | UBERON:0001473 | lymphatic vessel | Lymphatic Vessels | UBERON:0001265 | trabecula of spleen | Trabeculae | 142 | 25.0228 |
| 72 | UBERON:0003713 | splenic vein | Splenic Vein | UBERON:0001248 | hilum of spleen | Hilum | 133 | 8.25308 |
| 76 | UBERON:0001265 | trabecula of spleen | Trabeculae | UBERON:0004641 | spleen capsule | Capsule | 140 | 6.46161 |
| 77 | UBERON:0001265 | trabecula of spleen | Trabeculae | UBERON:0004641 | spleen capsule | Capsule | 139 | 6.46161 |
| 78 | UBERON:0001265 | trabecula of spleen | Trabeculae | UBERON:0004641 | spleen capsule | Capsule | 142 | 6.46161 |
| 79 | UBERON:0001265 | trabecula of spleen | Trabeculae | UBERON:0004641 | spleen capsule | Capsule | 141 | 6.46161 |
| 80 | UBERON:0001265 | trabecula of spleen | Trabeculae | UBERON:0004641 | spleen capsule | Capsule | 143 | 6.46161 |
| 84 | UBERON:0012373 | Sympathetic nerve plexus | Sympathetic nerves | UBERON:0001248 | hilum of spleen | Hilum | 134 | 4.56639 |
| 87 | UBERON:0001194 | splenic artery | Splenic Artery | UBERON:0001248 | hilum of spleen | Hilum | 132 | 4.56639 |
| 95 | UBERON:0001194 | Splenic Artery | Splenic Artery | UBERON:1000023 | spleen pulp | Splenic Pulp | 12 | nan |
| 97 | UBERON:0001194 | Splenic Artery | Splenic Artery | UBERON:1000023 | spleen pulp | Splenic Pulp | 13 | nan |
| 98 | UBERON:0012373 | Sympathetic nerve plexus | Sympathetic nerves | UBERON:0001194 | Splenic Artery | Splenic Artery | 13 | nan |
| 99 | UBERON:0012373 | Sympathetic nerve plexus | Sympathetic nerves | UBERON:0010401 | Spleen central arteriole | Spleen central arteriole | 14 | nan |
| 100 | UBERON:0003713 | splenic vein | Splenic Vein | UBERON:0001250 | red pulp of spleen | Red Pulp | 33 | nan |
| 134 | UBERON:0012373 | Sympathetic nerve plexus | Sympathetic nerves | UBERON:0001265 | trabecula of spleen | Trabeculae | 141 | nan |
Relationship CT-CT report
In the case of the CT-CT relationship, for each couple of terms, we verify for sub class of, part of and overlaps in the source ontologies. The deltaIC score is included because a high score (>50) can indicate that this order is reversed, e.g. TBA.
- No issues found.
Relationship CT-AS report
In the case of the AS-CT relationship, for each couple of terms, we verify for connected to and has part in the source ontologies.
| s | slabel | user_slabel | o | olabel | user_olabel | row_number | deltaIC | |
|---|---|---|---|---|---|---|---|---|
| 0 | CL:0000738 | leukocyte | leukocyte | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 52 | 45.7871 |
| 1 | CL:0000499 | stromal cell | stromal cell | UBERON:0003910 | splenic sinusoid | Splenic Sinusoid | 32 | 42.7503 |
| 2 | CL:0000499 | stromal cell | stromal cell | UBERON:0013132 | Penicillar Arteriole | Penicillar Arteriole | 19 | 42.7503 |
| 3 | CL:0000499 | stromal cell | stromal cell | UBERON:0013132 | Penicillar Arteriole | Penicillar Arteriole | 20 | 42.7503 |
| 4 | CL:0000499 | stromal cell | stromal cell | UBERON:0003910 | splenic sinusoid | Splenic Sinusoid | 30 | 42.7503 |
| 5 | CL:0000037 | hematopoietic stem cell | Hematopoetic Stem Cell | UBERON:0001266 | splenic cord | Splenic Cord | 36 | 41.3437 |
| 6 | CL:0000236 | B cell | B cell | UBERON:0001266 | splenic cord | Splenic Cord | 39 | 39.7612 |
| 7 | CL:0000192 | smooth muscle cell | smooth muscle cell | UBERON:0013132 | Penicillar Arteriole | Penicillar Arteriole | 21 | 38.3029 |
| 8 | CL:0000499 | stromal cell | stromal cell | UBERON:0001266 | splenic cord | Splenic Cord | 47 | 38.1839 |
| 9 | CL:0000236 | B cell | B cell | UBERON:0010421 | spleen B cell corona | Mantle Zone | 72 | 37.09 |
| 10 | CL:0000499 | stromal cell | Stromal Cell | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 53 | 35.5127 |
| 11 | CL:0000499 | stromal cell | stromal cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 124 | 35.5127 |
| 12 | CL:0000232 | erythrocyte | Erythrocytes | UBERON:0001266 | splenic cord | Splenic Cord | 38 | 35.0835 |
| 14 | CL:0000499 | stromal cell | stromal cell | UBERON:0010401 | spleen central arteriole | Periarteriolar Lymphoid Sheath (PALS) | 97 | 33.6175 |
| 15 | CL:0000232 | erythrocyte | Erythrocytes | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 49 | 32.4124 |
| 17 | CL:0000233 | platelet | Platelet | UBERON:0001266 | splenic cord | Splenic Cord | 45 | 31.4288 |
| 18 | CL:0000192 | smooth muscle cell | smooth muscle cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 110 | 31.0654 |
| 19 | CL:4033050 | catecholaminergic neuron | Catecholaminergic Neuron | UBERON:0012373 | Sympathetic nerve plexus | Sympathetic nerves | 108 | 27.4496 |
| 20 | CL:4033050 | catecholaminergic neuron | Catecholaminergic Neuron | UBERON:0010401 | spleen central arteriole | Periarteriolar Lymphoid Sheath (PALS) | 98 | 27.4496 |
| 21 | CL:4033050 | catecholaminergic neuron | Catecholaminergic Neuron | UBERON:0012373 | Sympathetic nerve plexus | Sympathetic nerves | 13 | 27.4496 |
| 22 | CL:4033050 | catecholaminergic neuron | Catecholaminergic Neuron | UBERON:0012373 | Sympathetic nerve plexus | Sympathetic nerves | 134 | 27.4496 |
| 23 | CL:4033050 | catecholaminergic neuron | Catecholaminergic Neuron | UBERON:0012373 | Sympathetic nerve plexus | Sympathetic nerves | 14 | 27.4496 |
| 24 | CL:4033050 | catecholaminergic neuron | Catecholaminergic Neuron | UBERON:0012373 | Sympathetic nerve plexus | Sympathetic nerves | 141 | 27.4496 |
| 25 | CL:0000623 | natural killer cell | NK Cell | UBERON:0001266 | splenic cord | Splenic Cord | 46 | 26.279 |
| 26 | CL:0000625 | CD8-positive, alpha-beta T cell | CD8+ T Cell | UBERON:0001266 | splenic cord | Splenic Cord | 40 | 26.1559 |
| 27 | CL:0000787 | memory B cell | Memory-Like B Cell | UBERON:0013132 | Penicillar Arteriole | Penicillar Arteriole | 17 | 26.1559 |
| 29 | CL:0000499 | stromal cell | stromal cell | UBERON:0001250 | red pulp of spleen | Red Pulp | 25 | 24.9099 |
| 30 | CL:0000990 | conventional dendritic cell | conventional dendritic cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 128 | 24.6755 |
| 31 | CL:0000990 | conventional dendritic cell | conventional dendritic cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 106 | 24.6755 |
| 32 | CL:0000990 | conventional dendritic cell | conventional dendritic cell | UBERON:0004641 | spleen capsule | Capsule | 137 | 24.6755 |
| 33 | CL:0000990 | conventional dendritic cell | conventional dendritic cell | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 58 | 24.6755 |
| 34 | CL:0000818 | transitional stage B cell | Transitional Immature B Cells | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 118 | 24.3567 |
| 35 | CL:0000818 | transitional stage B cell | Transitional Immature B Cells | UBERON:0010421 | spleen B cell corona | Mantle Zone | 73 | 24.3567 |
| 36 | CL:0000623 | natural killer cell | NK Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 130 | 23.6079 |
| 37 | CL:0000775 | neutrophil | Neutrophil | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 51 | 23.2956 |
| 38 | CL:0000798 | gamma-delta T cell | Gamma/Delta T cells | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 131 | 22.2587 |
| 39 | CL:0000786 | plasma cell | Plasma Cell | UBERON:0001266 | splenic cord | Splenic Cord | 42 | 21.7127 |
| 40 | CL:0000980 | plasmablast | Plasmablast | UBERON:0001266 | splenic cord | Splenic Cord | 43 | 21.3361 |
| 41 | CL:0000492 | CD4-positive helper T cell | CD4+ T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 100 | 21.1172 |
| 42 | CL:0000492 | CD4-positive helper T cell | CD4+ T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 112 | 21.1172 |
| 43 | CL:0000499 | stromal cell | stromal cell | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 88 | 19.9183 |
| 44 | CL:0002543 | vein endothelial cell | vein endothelial cell | UBERON:0003910 | splenic sinusoid | Splenic Sinusoid | 31 | 19.7356 |
| 45 | CL:0000788 | naive B Cell | Naive B Cell | UBERON:0013132 | Penicillar Arteriole | Penicillar Arteriole | 16 | 19.3977 |
| 46 | CL:0000990 | conventional dendritic cell | conventional dendritic cell | UBERON:0004041 | spleen primary B follicle | Primary Follicle | 65 | 19.0936 |
| 47 | CL:0000909 | CD8-positive, alpha-beta memory T cell | Memory CD8+ T Cell | UBERON:0001266 | splenic cord | Splenic Cord | 41 | 19.0415 |
| 48 | CL:0000972 | class switched memory B cell | Switched B Cell | UBERON:0013132 | Penicillar Arteriole | Penicillar Arteriole | 18 | 19.0415 |
| 49 | CL:0000787 | memory B cell | Memory B Cell | UBERON:0010421 | spleen B cell corona | Mantle Zone | 78 | 18.9183 |
| 50 | CL:0000815 | regulatory T cell | T Regulatory Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 116 | 18.9183 |
| 51 | CL:0000815 | regulatory T cell | T Regulatory Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 104 | 18.9183 |
| 52 | CL:0000980 | plasmablast | Plasmablast | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 129 | 18.6649 |
| 53 | CL:0000909 | CD8-positive, alpha-beta memory T cell | Non-Cytotoxic CD8+ Memory T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 120 | 16.3703 |
| 54 | CL:0000909 | CD8-positive, alpha-beta memory T cell | Cytotoxic Memory T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 119 | 16.3703 |
| 55 | CL:0002138 | endothelial cell of lymphatic vessel | Lymphatic Endothelium Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 109 | 15.9938 |
| 56 | CL:0000897 | CD4-positive, alpha-beta memory T cell | CD4+ Memory T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 121 | 15.9938 |
| 57 | CL:0000787 | memory B cell | Memory B Cell | UBERON:0004041 | spleen primary B follicle | Primary Follicle | 63 | 13.3364 |
| 58 | CL:0000895 | naive thymus-derived CD4-positive, alpha-beta T cell | Naive CD4+ T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 99 | 12.8195 |
| 59 | CL:0000895 | naive thymus-derived CD4-positive, alpha-beta T cell | Naive CD4+ T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 111 | 12.8195 |
| 60 | CL:0000788 | naive B cell | Naive B Cell | UBERON:0010421 | spleen B cell corona | Mantle Zone | 77 | 12.1601 |
| 61 | CL:0000900 | naive thymus-derived CD8-positive, alpha-beta T cell | Naive CD8+ T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 101 | 11.8039 |
| 62 | CL:0000900 | naive thymus-derived CD8-positive, alpha-beta T cell | Naive CD8+ T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 113 | 11.8039 |
| 63 | CL:0000442 | follicular dendritic cell | Follicular Dendritic Cell (FDC) | UBERON:0010421 | spleen B cell corona | Mantle Zone | 79 | 11.028 |
| 64 | CL:0000442 | follicular dendritic cell | Follicular Dendritic Cell (FDC) | UBERON:0010421 | spleen B cell corona | Mantle Zone | 74 | 11.028 |
| 65 | CL:0000980 | plasmablast | Plasmablast | UBERON:0005196 | spleen germinal center | Germinal Center | 71 | 10.1054 |
| 66 | CL:0000794 | CD8-positive, alpha-beta cytotoxic T cell | Cytotoxic T Cells | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 115 | 9.13277 |
| 67 | CL:0000794 | CD8-positive, alpha-beta cytotoxic T cell | Cytotoxic T Cells | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 103 | 9.13277 |
| 68 | CL:0000186 | myofibroblast cell | Myofibroblasts | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 122 | 9.13277 |
| 69 | CL:0000186 | myofibroblast cell | Myofibroblast | UBERON:0004641 | spleen capsule | Capsule | 136 | 9.13277 |
| 70 | CL:0000818 | transitional stage B cell | Transitional Immature B Cells | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 85 | 8.76227 |
| 71 | CL:0000787 | memory B cell | Memory-Like B Cell | UBERON:0001250 | red pulp of spleen | Red Pulp | 28 | 8.31553 |
| 73 | CL:0000775 | neutrophil | Neutrophil | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 93 | 7.70121 |
| 74 | CL:1000413 | endothelial cell of artery | Blood Endothelial Cells | UBERON:0001194 | splenic artery | Splenic Artery | 132 | 7.23755 |
| 75 | CL:0002543 | vein endothelial cell | Blood Endothelial Cells | UBERON:0003713 | splenic vein | Splenic Vein | 133 | 6.91613 |
| 81 | CL:0000844 | germinal center B cell | Germinal Center B Cell | UBERON:0005196 | spleen germinal center | Germinal Center | 67 | 5.66692 |
| 82 | CL:0000492 | CD4-positive helper T cell | CD4+ T cell | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 90 | 5.52283 |
| 83 | CL:0000442 | follicular dendritic cell | Follicular Dendritic Cell (FDC) | UBERON:0004041 | spleen primary B follicle | Primary Follicle | 61 | 5.44608 |
| 85 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0013132 | Penicillar Arteriole | Penicillar Arteriole | 15 | 4.56639 |
| 86 | CL:0001056 | dendritic cell, human | Dendritic Cell | UBERON:0001266 | splenic cord | Splenic Cord | 44 | 4.56639 |
| 88 | CL:0000786 | plasma cell | Plasma Cell | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 91 | 3.44711 |
| 89 | CL:0000787 | memory B cell | Memory B Cell | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 83 | 3.32397 |
| 90 | CL:0000186 | myofibroblast cell | Myofibroblast | UBERON:0001265 | trabecula of spleen | Trabeculae | 143 | 2.67116 |
| 91 | CL:0000442 | follicular dendritic cell | Follicular Dendritic Cell (FDC) | UBERON:0005196 | spleen germinal center | Germinal Center | 66 | 2.46844 |
| 92 | CL:0000788 | naive B Cell | Naive B Cell | UBERON:0001250 | red pulp of spleen | Red Pulp | 27 | 1.55731 |
| 93 | CL:0000972 | class switched memory B cell | Switched B Cell | UBERON:0001250 | red pulp of spleen | Red Pulp | 29 | 1.20112 |
| 94 | CL:0002038 | T follicular helper cell | T Follicular Helper Cell | UBERON:0005196 | spleen germinal center | Germinal Center | 68 | 0.573222 |
| 96 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0001194 | Splenic Artery | Splenic Artery | 12 | nan |
| 101 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0003713 | splenic vein | Splenic Vein | 33 | nan |
| 102 | CL:0000874 | splenic red pulp macrophage | Red Pulp Macrophage | UBERON:0001266 | splenic cord | Splenic Cord | 35 | nan |
| 103 | CL:0001055 | CD14-positive, CD16-low monocyte | Monocytes | UBERON:0001266 | splenic cord | Splenic Cord | 37 | nan |
| 104 | CL:0001055 | CD14-positive, CD16-low monocyte | Monocytes | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 50 | nan |
| 105 | CL:0002394 | CD141-positive myeloid dendritic cell | cDC1 myeloid dendritic cell | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 54 | nan |
| 106 | CL:0002399 | CD1c-positive myeloid dendritic cell | cDC2 myeloid dendritic cell | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 55 | nan |
| 107 | CL:0011031 | monocyte-derived dendritic cell | Monocyte-Derived DC | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 56 | nan |
| 108 | CL:0001058 | plasmacytoid dendritic cell, human | Plasmacytoid Dendritic Cell | UBERON:0005353 | spleen perifollicular zone | Perifollicular Zone | 57 | nan |
| 109 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0001959 | white pulp of spleen | White Pulp | 59 | nan |
| 110 | CL:0002138 | endothelial cell of lymphatic vessel | Lymphatic Endothelium Cell | UBERON:0001959 | white pulp of spleen | White Pulp | 60 | nan |
| 111 | CL:0000876 | splenic white pulp macrophage | Macrophage | UBERON:0004041 | spleen primary B follicle | Primary Follicle | 64 | nan |
| 112 | CL:0009113 | T follicular regulatory cell | T Follicular Regulatory Cell | UBERON:0005196 | spleen germinal center | Germinal Center | 69 | nan |
| 113 | CL:0000877 | splenic tingible body macrophage | Tingible Body Macrophage | UBERON:0005196 | spleen germinal center | Germinal Center | 70 | nan |
| 114 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0010421 | spleen B cell corona | Mantle Zone | 75 | nan |
| 115 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0010421 | spleen B cell corona | Mantle Zone | 81 | nan |
| 116 | CL:0000972 | class switched memory B cell | Switched B Cell | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 82 | nan |
| 117 | CL:0000442 | follicular dendritic cell | Follicular Dendritic Cell (FDC) | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 86 | nan |
| 118 | CL:0001058 | plasmacytoid dendritic cell, human | Plasmacytoid Dendritic Cell | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 89 | nan |
| 119 | CL:0001078 | group 3 innate lymphoid cell, human | Innate Lymphoid Cell (Type 3) | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 92 | nan |
| 120 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 94 | nan |
| 121 | CL:1000489 | reticular cell of splenic cord | Fibroblastic Reticular Cell (FRC) | UBERON:0001251 | Marginal Zone of Spleen | Superficial Zone | 95 | nan |
| 122 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0010401 | spleen central arteriole | Periarteriolar Lymphoid Sheath (PALS) | 96 | nan |
| 123 | CL:0001050 | effector CD8-positive, alpha-beta T cell | CD8+ T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 102 | nan |
| 124 | CL:1000489 | reticular cell of splenic cord | Fibroblastic Reticular Cell (FRC) | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 105 | nan |
| 125 | CL:0000876 | splenic white pulp macrophage | Macrophages | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 107 | nan |
| 126 | CL:0001050 | effector CD8-positive, alpha-beta T cell | CD8+ T Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 114 | nan |
| 127 | CL:1000489 | reticular cell of splenic cord | Fibroblastic Reticular Cell (FRC) | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 117 | nan |
| 128 | CL:0001058 | plasmacytoid dendritic cell, human | Plasmacytoid Dendritic Cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 123 | nan |
| 129 | CL:0002394 | CD141-positive myeloid dendritic cell | cDC1 myeloid dendritic cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 125 | nan |
| 130 | CL:0002399 | CD1c-positive myeloid dendritic cell | cDC2 myeloid dendritic cell | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 126 | nan |
| 131 | CL:0000876 | splenic white pulp macrophage | Macrophage | UBERON:0001960 | periarterial lymphatic sheath | Periarteriolar Lymphoid Sheath (PALS) | 127 | nan |
| 132 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0010399 | Spleen Trabecular Artery | Spleen Trabecular Artery | 139 | nan |
| 133 | CL:2000053 | splenic endothelial cell | Splenic endothelial cell | UBERON:0010400 | Spleen Trabecular Vein | Spleen Trabecular Vein | 140 | nan |