Other TSVs
publication
Related files:
- 📝 Excel template: For metadata entry.
- 📝 TSV template: Alternative for metadata entry.
Metadata schema
Version 0 (use this one)
version
Current version of metadata schema. Template provides the correct value.
| constraint | value |
|---|---|
| enum | 0 |
| required | True |
assay_type
The specific type of assay being executed.
| constraint | value |
|---|---|
| enum | publication |
| required | True |
contributors_path
Relative path to file with ORCID IDs for contributors for this dataset.
| constraint | value |
|---|---|
| required | True |
data_path
Relative path to file or directory with instrument data. Downstream processing will depend on filename extension conventions.
| constraint | value |
|---|---|
| required | True |
Directory schemas
| pattern | required? | description |
|---|---|---|
(data)/.+ (example: data/file1.ext) |
✓ | Supplementary data files for the publication. All files referenced by the Vitessce visualization configurations in the vignettes must be included in this directory. |
(vignettes)/.+ |
✓ | Subdirectory containing Vitessce visualization files and a description of those files. |
(vignettes)/(vignette)_\d+/[^/]+\.json (example: vignettes/vignette_01/file1.json) |
Vitessce visualization configuration files. One or more visualization configurations can be provided per vignette. | |
(vignettes)/(vignette)_\d+/(description)\.md (example: vignettes/vignette_02/description.md) |
Description of the vignette and titles for the visualization configuration files. | |
extras\/.* |
Folder for general lab-specific files related to the dataset. [Exists in all assays] |