Spatial Transcriptomics

Seq-Scope

Prepare your metadata based on the latest metadata schema using one of the template files below. See the instructions in the Metadata Validation Workflow document for more information on preparing and validating your metadata.tsv file prior to submission.

Related files:

Metadata schema

Version 2 (use this one)


Directory schemas

Version 2.0 (use this one)
pattern required? description
extras\/.* Folder for general lab-specific files related to the dataset.
raw\/.* This is a directory containing raw data.
raw\/seqscope\/.*   All relevent raw files for Seq-Scope.
lab_processed\/.* Experiment files that were processed by the lab generating the data.
lab_processed\/seqscope\/.*   All relevent experiment files for Seq-Scope.